Shopify to QuickBooks Desktop Integration See Plans

Shopify Integration for QuickBooks Desktop

Entriwise automates accounting, enables inventory tracking and offers per-product profitability for Shopify sellers using QuickBooks Desktop.


Discover a new way to handle your books

Audit stock in real time

Move away from time consuming manual inventory tracking to save your time and money.

Eliminate accidental mistakes

Stop worrying about costly human mistakes by eliminating manual entry altogether.

Be confident in your numbers

Benefit from completely automatic import and reconciliation against statements and payouts.

Step inside and see how it works

Entriwise is quick to sign up for, easy to use, yet advanced enough to support all your business needs

Import details Proper accounting without journal entries

Automate imports of everything, including sales, refunds, and fees, as proper QuickBooks Desktop accounting documents. Schedule imports hourly, daily or initiate them manually - all transactions will be imported as correct and fully itemized documents.

  • Fully itemized imports
  • Individual or grouped by day
  • Daily or hourly scheduling
Available in plans: Lite, Standard, Professional, Enterprise

Item mapping Itemized mapping to record all income and expenses

Handle all expenses associated with Shopify orders and refunds, including commissions, refund & return fees. Process non-order fees and charges, chargebacks, reimbursements, balance adjustments, etc.

  • Fully itemized imports
  • Grouping by day
  • Daily or hourly scheduling
Available in plans: Lite, Standard, Professional, Enterprise
Accounting documents

Advanced tracking Advanced accounting with classes

Use advanced features of QuickBooks Desktop such as classes to classify Shopify sales.

  • Income and expense tracking by class
  • Tracking by marketplace / country and fulfillment method
  • Per document classes and locations, per line classes
Available in plans: Lite, Professional, Enterprise

Inventory mapping Mapping Shopify SKUs to inventory products to enable inventory tracking

Map every product / SKU sold on Shopify to inventory items in QuickBooks Desktop / Enterprise to see quantity sold and refunded and corresponding COGS

  • Auto-mapping by SKU
  • Mapping by CSV file upload
  • Manual mapping using Web UI
Available in plans: Standard, Professional, Enterprise

Advanced inventory Assemblies, bundles, many-to-1 mapping for advanced inventory integration

Use many-to-1 mapping, mapping to QuickBooks Desktop / Enterprise inventory assemblies and creation of complex bundles.

  • Many-to-1 mapping to QuickBooks Desktop inventory products
  • Mapping to QuickBooks Desktop inventory assemblies
  • Complex bundles with price allocation rules
Available in plans: Professional, Enterprise

Inventory sites Inventory sites for precise inventory tracking

Benefit from support for QuickBooks Advanced Inventory using separate inventory sites for different fulfillment methods and marketplace / countries.

  • Inventory sites per fulfillment method
  • Inventory sites per Shopify marketplace / country
  • Product specific inventory sites
Available in plans: Professional, Enterprise

Cost of goods sold Actual COGS to calculate your product profitability

To track your product profitability, start with cost of good sold (COGS) defined in one of the two ways

  • Use actual COGS as reported by accounting / ERP software
  • Define COGS manually for each product
Available in plans: Professional, Enterprise

Additional costs Extra-COGS to record additional expenses

QuickBooks Desktop doesn't allow expenses like advertising to be tracked as per-product COGS. With Entriwise you can factor in various expenses as COGS to per product profitability calculations.

  • Fixed extra COGS in your marketplace currency
  • Extra COGS as percentage of actual COGS, fees or total sales
Available in plans: Professional, Enterprise

Sales fees Marketplace and processing fees as final cost component

QuickBooks Desktop cannot allocate your marketplace and processing fees to each product sold. With Entriwise you will be able to see your true marketplace, fulfillment and processing fees as costs of sales resulting in correct product profit and margin analytics.

  • Shopify commission
  • Shopify Payments fees
Available in plans: Professional, Enterprise

Your numbers will be reconciled to the penny!

Our unique automatic reconciliation algorithm guarantees 100% correct imports. Whether you process 1,000 or 1,000,000 orders per month, Entriwise imports will reconcile to the penny.

Entriwise app screenshot

Trusted by merchants in various retail industries

HidrateSpark Under Cut Charming Jewelers ISO Cali'flour

How it works

Get started in minutes, not hours

Grant Entriwise access to your Shopify and Shopify accounts and start importing transaction in a matter of minutes. No installation is required.

  • Import 2 payouts for free
  • Free 1-on-1 onboarding
  • No time limits on free trial
  • No payment details required

More questions? Let's talk

Stop worrying
about the time, effort and money it takes to perform proper accounting and inventory for e‑commerce business.
Tap to expertise
of our in-house CPAs, QuickBooks ProAdvisors, and NetSuite consultants - professionals who deeply understand your needs as a seller.
Find the solution
that works for your company and will be up and running as quickly as possible with minimum disruption to your business.